Gene detail information of Glyur000136s00007918.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G64220.20Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
NRXP_004485582.10PREDICTED: calmodulin-binding transcription activator 2-like isoform X1 [Cicer arietinum]
COGYP_004049702.13.00E-07hypothetical protein Ocepr_2334 [Oceanithermus profundus DSM 14977]
Swissprottr|Q9FY74|CMTA1_ARATH0Calmodulin-binding transcription activator 1
trEMBLtr|G7INW0|G7INW0_MEDTR0Calmodulin-binding transcription activator 1 {ECO:0000313|EMBL:AES63449.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00136115108125160+


Gene family

Gene familysubfamily
Transcription Factors FamilyCAMTA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000136s00007918.2PF03859.11CG-1221361.60E-52
Glyur000136s00007918.2PF01833.19TIG4385222.20E-05
Glyur000136s00007918.2PF12796.2Ank_26276988.10E-10
Glyur000136s00007918.2PF00612.22IQ8488660.0016
Glyur000136s00007918.2PF00612.22IQ8718900.00018


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.421
SRR1783600control15.578
SRR1783602moderate drought stress20.937
SRR1811619moderate drought stress20.733

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.480
DRR006520Root Summer glycyrrhizin high producing strain16.329
DRR006521Root Winter glycyrrhizin high producing strain22.428
DRR006522Root Winter glycyrrhizin high producing strain22.034
DRR006523Root Summer glycyrrhizin low producing strain17.673
DRR006524Root Summer glycyrrhizin low producing strain17.612
DRR006525Leaf Summer glycyrrhizin high producing strain11.019
DRR006526Leaf Summer glycyrrhizin high producing strain11.092

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.356
SRR2868004Drought Stress(Tissue:root)50.330
SRR2967015Control (Tissue:root)52.284

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.121
SRR9715740Leave19.430
SRR9715741Leave26.484
SRR9715739Root5.851
SRR9715742Root21.900
SRR9715743Root19.668

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h40.663
SRR8749028MeJA induced 9h84.705
SRR8749029MeJA induced 9h36.301
SRR8749030Uninduced40.882
SRR8749031Uninduced53.840
SRR8749032Uninduced28.448

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.818
SRR8400027Control-Root27.105

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved