Gene detail information of Glyur000137s00013335.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25310.1 | 9.00E-142 | Exostosin family protein |
| NR | XP_004501350.1 | 0 | PREDICTED: probable glycosyltransferase At5g25310-like [Cicer arietinum] |
| COG | YP_677520.1 | 6.00E-06 | hypothetical protein CHU_0899 [Cytophaga hutchinsonii ATCC 33406] |
| Swissprot | tr|Q3E7Q9|GLYT6_ARATH | 3.00E-179 | Probable glycosyltransferase At5g25310 |
| trEMBL | tr|V7AUJ6|V7AUJ6_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08995.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00137 | 179061 | 182038 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT47 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000137s00013335.1 | PF03016.10 | Exostosin | 112 | 398 | 3.70E-65 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.027 |
| SRR1783600 | control | 0.027 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.565 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.421 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.080 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.274 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.216 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.037 |
| SRR2967015 | Control (Tissue:root) | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.036 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.137 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.092 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.651 |
| SRR8749028 | MeJA induced 9h | 0.144 |
| SRR8749029 | MeJA induced 9h | 0.045 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.203 |
| SRR8400027 | Control-Root | 0.325 |