Gene detail information of Glyur000137s00013346.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32280.1 | 1.00E-22 | indole-3-acetic acid inducible 29 |
| NR | XP_004501338.1 | 1.98E-77 | PREDICTED: auxin-responsive protein IAA29-like [Cicer arietinum] |
| Swissprot | tr|Q93WC4|IAA29_ARATH | 3.00E-26 | Auxin-responsive protein IAA29 |
| trEMBL | tr|I1K8U1|I1K8U1_SOYBN | 2.00E-77 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00137 | 265296 | 266750 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
| EAR motif-containing Proteins | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000137s00013346.1 | PF02309.11 | AUX_IAA | 99 | 199 | 4.00E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.306 |
| SRR1783600 | control | 1.350 |
| SRR1783602 | moderate drought stress | 1.921 |
| SRR1811619 | moderate drought stress | 1.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.267 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.190 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.296 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.191 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.389 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.788 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.530 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.327 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.534 |
| SRR2967015 | Control (Tissue:root) | 8.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.443 |
| SRR9715740 | Leave | 4.966 |
| SRR9715741 | Leave | 3.596 |
| SRR9715739 | Root | 0.137 |
| SRR9715742 | Root | 4.508 |
| SRR9715743 | Root | 2.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.857 |
| SRR8749028 | MeJA induced 9h | 0.070 |
| SRR8749029 | MeJA induced 9h | 0.652 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.077 |
| SRR8400027 | Control-Root | 1.168 |