Gene detail information of Glyur000137s00013348.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32290.1 | 4.00E-104 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| NR | XP_003603381.1 | 0 | hypothetical protein MTR_3g106930 [Medicago truncatula] |
| trEMBL | tr|G7JAJ3|G7JAJ3_MEDTR | 0 | Core-2/I-branching enzyme {ECO:0000313|EMBL:AES73632.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00137 | 280618 | 281772 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000137s00013348.1 | PF02485.16 | Branch | 99 | 334 | 4.10E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.063 |
| SRR1783600 | control | 0.064 |
| SRR1783602 | moderate drought stress | 0.164 |
| SRR1811619 | moderate drought stress | 0.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.118 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.186 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.383 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.383 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.483 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.193 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.386 |
| SRR2967015 | Control (Tissue:root) | 0.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.273 |
| SRR9715740 | Leave | 0.243 |
| SRR9715741 | Leave | 0.089 |
| SRR9715739 | Root | 3.173 |
| SRR9715742 | Root | 1.475 |
| SRR9715743 | Root | 1.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.527 |
| SRR8749028 | MeJA induced 9h | 11.161 |
| SRR8749029 | MeJA induced 9h | 6.870 |
| SRR8749030 | Uninduced | 3.637 |
| SRR8749031 | Uninduced | 2.334 |
| SRR8749032 | Uninduced | 7.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.236 |
| SRR8400027 | Control-Root | 0.388 |