Gene detail information of Glyur000138s00011655.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G08380.12.00E-139alpha-galactosidase 1
NRXP_004492578.10PREDICTED: alpha-galactosidase-like [Cicer arietinum]
COGYP_004960350.12.00E-91secreted alpha-galactosidase [Streptomyces bingchenggensis BCW-1]
Swissprottr|Q42656|AGAL_COFAR6.00E-136Alpha-galactosidase (Precursor)
trEMBLtr|A0A072U1H6|A0A072U1H6_MEDTR0Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001383040934289+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH27


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07407E3.2.1.22B, galA, rafA EC:3.2.1.22 Galactose metabolism map00052
Glycerolipid metabolismmap00561
Sphingolipid metabolismmap00600
Glycosphingolipid biosynthesis - globo and isoglobo seriesmap00603


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000138s00011655.1PF02065.13Melibiase181441.80E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.196
SRR1783600control17.379
SRR1783602moderate drought stress3.737
SRR1811619moderate drought stress3.673

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.304
DRR006520Root Summer glycyrrhizin high producing strain10.245
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.148
DRR006523Root Summer glycyrrhizin low producing strain2.409
DRR006524Root Summer glycyrrhizin low producing strain2.394
DRR006525Leaf Summer glycyrrhizin high producing strain5.476
DRR006526Leaf Summer glycyrrhizin high producing strain5.018

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.979
SRR2868004Drought Stress(Tissue:root)17.128
SRR2967015Control (Tissue:root)17.959

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.796
SRR9715740Leave12.503
SRR9715741Leave8.737
SRR9715739Root10.704
SRR9715742Root9.857
SRR9715743Root10.130

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.725
SRR8749028MeJA induced 9h0.520
SRR8749029MeJA induced 9h0.812
SRR8749030Uninduced0.103
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.849
SRR8400027Control-Root31.138

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved