Gene detail information of Glyur000138s00011671.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G01950.10Leucine-rich repeat protein kinase family protein
NRXP_007140045.10hypothetical protein PHAVU_008G079800g [Phaseolus vulgaris]
COGYP_001192956.13.00E-42two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGD7|Y1684_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g06840 (Precursor)
trEMBLtr|V7B2I0|V7B2I0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW12039.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00138131906139549+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000138s00011671.1PF08263.7LRRNT_230684.60E-07
Glyur000138s00011671.1PF00560.28LRR_11271490.41
Glyur000138s00011671.1PF07714.12Pkinase_Tyr5497363.40E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.890
SRR1783600control8.887
SRR1783602moderate drought stress14.615
SRR1811619moderate drought stress14.446

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.459
DRR006520Root Summer glycyrrhizin high producing strain6.897
DRR006521Root Winter glycyrrhizin high producing strain4.947
DRR006522Root Winter glycyrrhizin high producing strain4.393
DRR006523Root Summer glycyrrhizin low producing strain7.799
DRR006524Root Summer glycyrrhizin low producing strain7.200
DRR006525Leaf Summer glycyrrhizin high producing strain7.654
DRR006526Leaf Summer glycyrrhizin high producing strain7.227

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.538
SRR2868004Drought Stress(Tissue:root)28.354
SRR2967015Control (Tissue:root)30.197

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.654
SRR9715740Leave26.378
SRR9715741Leave30.348
SRR9715739Root0.677
SRR9715742Root7.733
SRR9715743Root6.018

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.250
SRR8749028MeJA induced 9h20.974
SRR8749029MeJA induced 9h11.818
SRR8749030Uninduced21.443
SRR8749031Uninduced27.209
SRR8749032Uninduced13.473

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.501
SRR8400027Control-Root16.117

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved