Gene detail information of Glyur000138s00011702.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09780.10Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
NRKHN29462.102,3-bisphosphoglycerate-independent phosphoglycerate mutase [Glycine soja]
COGYP_004513631.14.00E-169phosphoglycerate mutase [Methylomonas methanica MC09]
Swissprottr|Q42908|PMGI_MESCR02,3-bisphosphoglycerate-independent phosphoglycerate mutase
trEMBLtr|I1L6W0|I1L6W0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G40690.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00138289873294741-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15633gpmI EC:5.4.2.12 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Glycine, serine and threonine metabolismmap00260


Gene Ontology

biological_process

GO:0006007  glucose catabolic process

GO:0008152  metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0004619  phosphoglycerate mutase activity

GO:0030145  manganese ion binding

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000138s00011702.2PF01676.13Metalloenzyme205502.90E-89
Glyur000138s00011702.2PF06415.8iPGM_N1003302.00E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control76.602
SRR1783600control77.088
SRR1783602moderate drought stress59.122
SRR1811619moderate drought stress58.764

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain146.717
DRR006520Root Summer glycyrrhizin high producing strain145.373
DRR006521Root Winter glycyrrhizin high producing strain802.217
DRR006522Root Winter glycyrrhizin high producing strain781.584
DRR006523Root Summer glycyrrhizin low producing strain111.108
DRR006524Root Summer glycyrrhizin low producing strain110.725
DRR006525Leaf Summer glycyrrhizin high producing strain113.032
DRR006526Leaf Summer glycyrrhizin high producing strain111.556

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)464.657
SRR2868004Drought Stress(Tissue:root)304.096
SRR2967015Control (Tissue:root)317.706

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave91.345
SRR9715740Leave93.958
SRR9715741Leave110.870
SRR9715739Root58.006
SRR9715742Root124.171
SRR9715743Root119.153

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h187.748
SRR8749028MeJA induced 9h212.091
SRR8749029MeJA induced 9h244.937
SRR8749030Uninduced183.542
SRR8749031Uninduced177.465
SRR8749032Uninduced152.858

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root229.118
SRR8400027Control-Root227.860

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved