Gene detail information of Glyur000139s00009276.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G07780.51.00E-60phosphoribosylanthranilate isomerase 1
NRXP_004500497.12.35E-94PREDICTED: n-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic-like [Cicer arietinum]
COGYP_001424612.27.00E-21bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta [Coxiella burnetii Dugway 5J108-111]
Swissprottr|Q42440|PAI1_ARATH2.00E-82N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic (Precursor)
trEMBLtr|A0A072UYC1|A0A072UYC1_MEDTR3.00E-94N-(5-phosphoribosyl)anthranilate isomerase {ECO:0000313|EMBL:KEH34799.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001396427267304-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01817trpF EC:5.3.1.24 Biosynthesis of amino acids map01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400


Gene Ontology

biological_process

GO:0006568  tryptophan metabolic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004640  phosphoribosylanthranilate isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000139s00009276.1PF00697.17PRAI741791.40E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.419
SRR1783600control1.527
SRR1783602moderate drought stress1.391
SRR1811619moderate drought stress1.346

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.726
DRR006520Root Summer glycyrrhizin high producing strain2.940
DRR006521Root Winter glycyrrhizin high producing strain2.980
DRR006522Root Winter glycyrrhizin high producing strain2.778
DRR006523Root Summer glycyrrhizin low producing strain3.031
DRR006524Root Summer glycyrrhizin low producing strain2.932
DRR006525Leaf Summer glycyrrhizin high producing strain0.939
DRR006526Leaf Summer glycyrrhizin high producing strain1.072

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.022
SRR2868004Drought Stress(Tissue:root)3.663
SRR2967015Control (Tissue:root)3.959

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.445
SRR9715740Leave0.822
SRR9715741Leave1.778
SRR9715739Root0.655
SRR9715742Root2.558
SRR9715743Root2.485

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.911
SRR8749028MeJA induced 9h3.007
SRR8749029MeJA induced 9h3.987
SRR8749030Uninduced1.660
SRR8749031Uninduced0.378
SRR8749032Uninduced0.727

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.019
SRR8400027Control-Root6.821

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved