Gene detail information of Glyur000139s00009298.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50860.10Protein kinase superfamily protein
NRXP_004501733.10PREDICTED: probable serine/threonine-protein kinase At1g54610-like isoform X1 [Cicer arietinum]
COGYP_003371239.16.00E-21serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|Q9ZVM9|Y1461_ARATH0Probable serine/threonine-protein kinase At1g54610
trEMBLtr|I1KBZ2|I1KBZ2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G17460.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00139265029269567-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000139s00009298.1PF00069.20Pkinase993692.10E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.882
SRR1783600control16.859
SRR1783602moderate drought stress16.941
SRR1811619moderate drought stress16.522

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.405
DRR006520Root Summer glycyrrhizin high producing strain16.240
DRR006521Root Winter glycyrrhizin high producing strain19.649
DRR006522Root Winter glycyrrhizin high producing strain19.361
DRR006523Root Summer glycyrrhizin low producing strain29.652
DRR006524Root Summer glycyrrhizin low producing strain29.888
DRR006525Leaf Summer glycyrrhizin high producing strain18.966
DRR006526Leaf Summer glycyrrhizin high producing strain18.858

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.370
SRR2868004Drought Stress(Tissue:root)33.151
SRR2967015Control (Tissue:root)26.640

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.314
SRR9715740Leave23.366
SRR9715741Leave20.278
SRR9715739Root15.823
SRR9715742Root15.178
SRR9715743Root14.928

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.893
SRR8749028MeJA induced 9h24.124
SRR8749029MeJA induced 9h11.929
SRR8749030Uninduced16.593
SRR8749031Uninduced4.382
SRR8749032Uninduced4.129

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.886
SRR8400027Control-Root23.914

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved