Gene detail information of Glyur000139s00009301.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13180.1 | 1.00E-13 | NAC domain containing protein 83 |
| NR | XP_003528094.1 | 1.66E-23 | PREDICTED: NAC transcription factor ONAC010 [Glycine max] |
| Swissprot | tr|Q8GY42|NAC25_ARATH | 8.00E-10 | NAC transcription factor 25 |
| trEMBL | tr|K7KL84|K7KL84_SOYBN | 7.00E-33 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G37590.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00139 | 286656 | 288118 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000139s00009301.1 | PF02365.10 | NAM | 14 | 52 | 3.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.353 |
| SRR1783600 | control | 2.407 |
| SRR1783602 | moderate drought stress | 1.399 |
| SRR1811619 | moderate drought stress | 0.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.294 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.823 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.999 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.547 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.861 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.196 |
| SRR2967015 | Control (Tissue:root) | 3.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.061 |
| SRR9715740 | Leave | 0.140 |
| SRR9715741 | Leave | 0.073 |
| SRR9715739 | Root | 0.727 |
| SRR9715742 | Root | 2.451 |
| SRR9715743 | Root | 1.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.618 |
| SRR8400027 | Control-Root | 2.780 |