Gene detail information of Glyur000139s00009304.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26935.1 | 3.00E-130 | DHHC-type zinc finger family protein |
| NR | XP_004501727.1 | 0 | PREDICTED: probable S-acyltransferase At3g26935-like [Cicer arietinum] |
| Swissprot | tr|Q0WQK2|ZDHC9_ARATH | 2.00E-167 | Probable protein S-acyltransferase 7 |
| trEMBL | tr|G7J3C1|G7J3C1_MEDTR | 0 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00139 | 294054 | 297901 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K16675 | ZDHHC9_14_18 | EC:2.3.1.225 | Hippo signaling pathway -fly | map04391 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000139s00009304.1 | PF01529.15 | zf-DHHC | 100 | 280 | 2.30E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.128 |
| SRR1783600 | control | 3.148 |
| SRR1783602 | moderate drought stress | 4.463 |
| SRR1811619 | moderate drought stress | 4.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.791 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.572 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.654 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.174 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.645 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.400 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.719 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 25.880 |
| SRR2868004 | Drought Stress(Tissue:root) | 43.502 |
| SRR2967015 | Control (Tissue:root) | 36.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.467 |
| SRR9715740 | Leave | 4.571 |
| SRR9715741 | Leave | 11.402 |
| SRR9715739 | Root | 1.820 |
| SRR9715742 | Root | 3.795 |
| SRR9715743 | Root | 2.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.848 |
| SRR8749028 | MeJA induced 9h | 42.275 |
| SRR8749029 | MeJA induced 9h | 22.306 |
| SRR8749030 | Uninduced | 110.995 |
| SRR8749031 | Uninduced | 142.563 |
| SRR8749032 | Uninduced | 68.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.213 |
| SRR8400027 | Control-Root | 12.181 |