Gene detail information of Glyur000140s00011441.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36220.10ferulic acid 5-hydroxylase 1
NRXP_003612110.10Cytochrome P450 [Medicago truncatula]
COGYP_007126612.15.00E-35Unspecific monooxygenase [Gloeocapsa sp. PCC 7428]
Swissprottr|Q42600|C84A1_ARATH0Cytochrome P450 84A1
trEMBLtr|G7KGC6|G7KGC6_MEDTR0Cytochrome P450 family ferulate hydroxylase {ECO:0000313|EMBL:AES95068.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001401921123392+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP84A1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09755CYP84A, F5H EC:1.14.-.- Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000140s00011441.1PF00067.17p450525139.60E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.202
SRR1783600control6.237
SRR1783602moderate drought stress6.754
SRR1811619moderate drought stress6.735

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.955
DRR006520Root Summer glycyrrhizin high producing strain10.057
DRR006521Root Winter glycyrrhizin high producing strain129.690
DRR006522Root Winter glycyrrhizin high producing strain126.914
DRR006523Root Summer glycyrrhizin low producing strain11.004
DRR006524Root Summer glycyrrhizin low producing strain11.028
DRR006525Leaf Summer glycyrrhizin high producing strain13.225
DRR006526Leaf Summer glycyrrhizin high producing strain13.192

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.125
SRR2868004Drought Stress(Tissue:root)22.869
SRR2967015Control (Tissue:root)41.457

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.908
SRR9715740Leave28.343
SRR9715741Leave37.981
SRR9715739Root19.088
SRR9715742Root15.067
SRR9715743Root15.248

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.976
SRR8749028MeJA induced 9h52.081
SRR8749029MeJA induced 9h27.422
SRR8749030Uninduced32.758
SRR8749031Uninduced15.226
SRR8749032Uninduced18.595

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.916
SRR8400027Control-Root22.857

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved