Gene detail information of Glyur000140s00011459.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36180.10Leucine-rich receptor-like protein kinase family protein
NRXP_004512119.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Cicer arietinum]
COGYP_004775215.12.00E-58RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGS2|Y4361_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g36180 (Precursor)
trEMBLtr|I1LHZ9|I1LHZ9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G07970.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00140110774114163+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000140s00011459.1PF08263.7LRRNT_227651.20E-10
Glyur000140s00011459.1PF12799.2LRR_41631983.40E-07
Glyur000140s00011459.1PF00560.28LRR_12582800.18
Glyur000140s00011459.1PF13855.1LRR_84084674.80E-08
Glyur000140s00011459.1PF00560.28LRR_14815020.12
Glyur000140s00011459.1PF13855.1LRR_85045621.10E-06
Glyur000140s00011459.1PF00560.28LRR_15765980.053
Glyur000140s00011459.1PF00560.28LRR_16246460.043
Glyur000140s00011459.1PF13855.1LRR_86477074.10E-08
Glyur000140s00011459.1PF00069.20Pkinase84510542.10E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.696
SRR1783600control1.682
SRR1783602moderate drought stress1.021
SRR1811619moderate drought stress0.985

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.520
DRR006520Root Summer glycyrrhizin high producing strain1.507
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.408
DRR006524Root Summer glycyrrhizin low producing strain1.458
DRR006525Leaf Summer glycyrrhizin high producing strain0.240
DRR006526Leaf Summer glycyrrhizin high producing strain0.260

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.834
SRR2868004Drought Stress(Tissue:root)6.012
SRR2967015Control (Tissue:root)5.756

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.605
SRR9715740Leave0.126
SRR9715741Leave0.074
SRR9715739Root1.105
SRR9715742Root1.645
SRR9715743Root1.373

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.186
SRR8749028MeJA induced 9h0.453
SRR8749029MeJA induced 9h0.651
SRR8749030Uninduced0.056
SRR8749031Uninduced0.026
SRR8749032Uninduced0.017

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.458
SRR8400027Control-Root10.196

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved