Gene detail information of Glyur000141s00009798.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45110.15.00E-155NPR1-like protein 3
NRXP_003617362.10NPR1-1 protein [Medicago truncatula]
Swissprottr|Q8L746|NPR3_ARATH0Regulatory protein NPR3
trEMBLtr|G7K396|G7K396_MEDTR0NPR1/NIM1-like regulatory protein, putative {ECO:0000313|EMBL:AET00321.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001411533019695-


Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF
Ubiquitin FamilyBTB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000141s00009798.1PF00651.26BTB621411.10E-10
Glyur000141s00009798.1PF11900.3DUF34202282731.50E-10
Glyur000141s00009798.1PF12796.2Ank_22773585.10E-09
Glyur000141s00009798.1PF12313.3NPR1_like_C3755733.10E-81


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.529
SRR1783600control25.556
SRR1783602moderate drought stress33.609
SRR1811619moderate drought stress33.765

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.031
DRR006520Root Summer glycyrrhizin high producing strain18.048
DRR006521Root Winter glycyrrhizin high producing strain13.446
DRR006522Root Winter glycyrrhizin high producing strain12.930
DRR006523Root Summer glycyrrhizin low producing strain14.569
DRR006524Root Summer glycyrrhizin low producing strain14.811
DRR006525Leaf Summer glycyrrhizin high producing strain12.794
DRR006526Leaf Summer glycyrrhizin high producing strain12.834

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.809
SRR2868004Drought Stress(Tissue:root)68.526
SRR2967015Control (Tissue:root)66.219

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.476
SRR9715740Leave50.706
SRR9715741Leave43.269
SRR9715739Root26.426
SRR9715742Root51.392
SRR9715743Root46.883

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.232
SRR8749028MeJA induced 9h17.911
SRR8749029MeJA induced 9h10.130
SRR8749030Uninduced15.134
SRR8749031Uninduced8.344
SRR8749032Uninduced9.453

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.239
SRR8400027Control-Root47.502

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved