Gene detail information of Glyur000141s00009815.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G43020.10polyamine oxidase 2
NRXP_004491274.10PREDICTED: probable polyamine oxidase 2-like isoform X1 [Cicer arietinum]
COGYP_006874256.12.00E-66amine oxidase [Emticicia oligotrophica DSM 17448]
Swissprottr|Q9SKX5|PAO2_ARATH0Probable polyamine oxidase 2
trEMBLtr|G7KD02|G7KD02_MEDTR0Polyamine oxidase-like protein {ECO:0000313|EMBL:AET00277.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0014198983103244+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17839PAO4, PAO3, PAO2 EC:1.5.3.17 1.5.3.- Arginine and proline metabolism map00330
beta-Alanine metabolismmap00410


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000141s00009815.1PF01593.19Amino_oxidase374567.00E-99


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.748
SRR1783600control11.804
SRR1783602moderate drought stress8.869
SRR1811619moderate drought stress8.870

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.691
DRR006520Root Summer glycyrrhizin high producing strain24.078
DRR006521Root Winter glycyrrhizin high producing strain43.734
DRR006522Root Winter glycyrrhizin high producing strain48.150
DRR006523Root Summer glycyrrhizin low producing strain24.707
DRR006524Root Summer glycyrrhizin low producing strain23.894
DRR006525Leaf Summer glycyrrhizin high producing strain22.072
DRR006526Leaf Summer glycyrrhizin high producing strain21.717

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.613
SRR2868004Drought Stress(Tissue:root)44.849
SRR2967015Control (Tissue:root)57.475

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.222
SRR9715740Leave29.903
SRR9715741Leave25.215
SRR9715739Root4.732
SRR9715742Root13.900
SRR9715743Root12.683

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.196
SRR8749028MeJA induced 9h33.706
SRR8749029MeJA induced 9h23.201
SRR8749030Uninduced33.932
SRR8749031Uninduced40.237
SRR8749032Uninduced34.889

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.915
SRR8400027Control-Root47.871

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved