Gene detail information of Glyur000141s00009831.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT2G13360.2 | 0 | alanine:glyoxylate aminotransferase |
NR | XP_004499480.1 | 0 | PREDICTED: serine--glyoxylate aminotransferase-like [Cicer arietinum] |
COG | YP_002362023.1 | 5.00E-141 | class V aminotransferase [Methylocella silvestris BL2] |
Swissprot | tr|Q56YA5|SGAT_ARATH | 0 | Serine--glyoxylate aminotransferase |
trEMBL | tr|G7J013|G7J013_MEDTR | 0 | Serine-glyoxylate aminotransferase-like protein {ECO:0000313|EMBL:AES70410.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00141 | 214826 | 218296 | + |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000141s00009831.1 | PF00266.14 | Aminotran_5 | 12 | 222 | 2.90E-24 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.000 |
SRR1783600 | control | 0.050 |
SRR1783602 | moderate drought stress | 0.127 |
SRR1811619 | moderate drought stress | 0.132 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.102 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.085 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.089 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.086 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 80.522 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 82.279 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 7.892 |
SRR2868004 | Drought Stress(Tissue:root) | 21.293 |
SRR2967015 | Control (Tissue:root) | 30.034 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 111.108 |
SRR9715740 | Leave | 164.331 |
SRR9715741 | Leave | 99.225 |
SRR9715739 | Root | 0.040 |
SRR9715742 | Root | 0.174 |
SRR9715743 | Root | 0.042 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 7.943 |
SRR8749028 | MeJA induced 9h | 13.707 |
SRR8749029 | MeJA induced 9h | 9.924 |
SRR8749030 | Uninduced | 14.206 |
SRR8749031 | Uninduced | 74.325 |
SRR8749032 | Uninduced | 56.877 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 3.655 |
SRR8400027 | Control-Root | 4.422 |