Gene detail information of Glyur000141s00009840.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03250.1 | 6.00E-79 | Homeodomain-like superfamily protein |
| NR | XP_004491248.1 | 0 | PREDICTED: uncharacterized protein LOC101506919 [Cicer arietinum] |
| trEMBL | tr|I1M740|I1M740_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G03850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00141 | 266259 | 271794 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000141s00009840.1 | PF00046.24 | Homeobox | 21 | 75 | 2.00E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.732 |
| SRR1783600 | control | 17.865 |
| SRR1783602 | moderate drought stress | 19.555 |
| SRR1811619 | moderate drought stress | 19.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.844 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.742 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.214 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.909 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.068 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.882 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.807 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 30.101 |
| SRR2868004 | Drought Stress(Tissue:root) | 34.489 |
| SRR2967015 | Control (Tissue:root) | 36.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 16.918 |
| SRR9715740 | Leave | 18.783 |
| SRR9715741 | Leave | 18.343 |
| SRR9715739 | Root | 1.522 |
| SRR9715742 | Root | 9.955 |
| SRR9715743 | Root | 8.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.792 |
| SRR8749028 | MeJA induced 9h | 50.361 |
| SRR8749029 | MeJA induced 9h | 63.921 |
| SRR8749030 | Uninduced | 32.307 |
| SRR8749031 | Uninduced | 59.853 |
| SRR8749032 | Uninduced | 38.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 29.517 |
| SRR8400027 | Control-Root | 26.791 |