Gene detail information of Glyur000142s00009116.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04580.20Signal transduction histidine kinase, hybrid-type, ethylene sensor
NRXP_003626476.10Ethylene receptor [Medicago truncatula]
COGYP_007144470.12.00E-49multi-sensor hybrid histidine kinase [Crinalium epipsammum PCC 9333]
Swissprottr|Q9ZTP3|EIN4_ARATH0Protein EIN4
trEMBLtr|G7L2X0|G7L2X0_MEDTR0Ethylene receptor {ECO:0000313|EMBL:AES82694.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00142202999208192+


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14509ETR, ERS EC:2.7.13.- MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0007165  signal transduction

GO:0009873  ethylene-activated signaling pathway


cellular_component

GO:0005789  endoplasmic reticulum membrane

GO:0016020  membrane


molecular_function

GO:0000155  phosphorelay sensor kinase activity

GO:0004673  protein histidine kinase activity

GO:0004871  signal transducer activity

GO:0005515  protein binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000142s00009116.1PF01590.21GAF1883351.10E-11
Glyur000142s00009116.1PF00512.20HisKA3734353.70E-07
Glyur000142s00009116.1PF00072.19Response_reg6377507.60E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.820
SRR1783600control5.903
SRR1783602moderate drought stress6.274
SRR1811619moderate drought stress6.262

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.200
DRR006520Root Summer glycyrrhizin high producing strain7.181
DRR006521Root Winter glycyrrhizin high producing strain12.231
DRR006522Root Winter glycyrrhizin high producing strain11.864
DRR006523Root Summer glycyrrhizin low producing strain8.457
DRR006524Root Summer glycyrrhizin low producing strain8.252
DRR006525Leaf Summer glycyrrhizin high producing strain4.996
DRR006526Leaf Summer glycyrrhizin high producing strain5.034

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.279
SRR2868004Drought Stress(Tissue:root)7.244
SRR2967015Control (Tissue:root)6.625

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.808
SRR9715740Leave3.597
SRR9715741Leave3.759
SRR9715739Root4.346
SRR9715742Root6.958
SRR9715743Root7.637

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.236
SRR8749028MeJA induced 9h8.669
SRR8749029MeJA induced 9h5.997
SRR8749030Uninduced10.432
SRR8749031Uninduced13.064
SRR8749032Uninduced6.617

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.365
SRR8400027Control-Root10.340

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved