Gene detail information of Glyur000142s00009134.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G31180.16.00E-55myb domain protein 14
NRKEH24596.16.70E-116myb transcription factor [Medicago truncatula]
Swissprottr|Q7XBH4|MYB4_ORYSJ7.00E-70Myb-related protein Myb4
trEMBLtr|A0A072U5D9|A0A072U5D9_MEDTR3.00E-116Myb transcription factor {ECO:0000313|EMBL:KEH24596.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00142309237310466-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000142s00009134.1PF00249.26Myb_DNA-binding24712.60E-14
Glyur000142s00009134.1PF00249.26Myb_DNA-binding771286.40E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.052
SRR1783600control0.099
SRR1783602moderate drought stress0.185
SRR1811619moderate drought stress0.102

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.223
DRR006520Root Summer glycyrrhizin high producing strain0.231
DRR006521Root Winter glycyrrhizin high producing strain0.150
DRR006522Root Winter glycyrrhizin high producing strain0.147
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.149
DRR006525Leaf Summer glycyrrhizin high producing strain1.875
DRR006526Leaf Summer glycyrrhizin high producing strain1.615

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.347
SRR2868004Drought Stress(Tissue:root)0.856
SRR2967015Control (Tissue:root)0.338

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.440
SRR9715740Leave0.543
SRR9715741Leave0.694
SRR9715739Root0.000
SRR9715742Root0.241
SRR9715743Root0.249

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.614
SRR8749028MeJA induced 9h0.456
SRR8749029MeJA induced 9h0.630
SRR8749030Uninduced2.039
SRR8749031Uninduced1.022
SRR8749032Uninduced1.171

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.607
SRR8400027Control-Root0.917

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved