Gene detail information of Glyur000143s00011185.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23740.10Leucine-rich repeat protein kinase family protein
NRXP_003611028.10Probably inactive receptor-like protein kinase [Medicago truncatula]
COGYP_004163701.11.00E-18hypothetical protein [Cellulophaga algicola DSM 14237]
Swissprottr|Q9SUQ3|Y4374_ARATH0Probable inactive receptor kinase At4g23740 (Precursor)
trEMBLtr|G7KAP0|G7KAP0_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES93986.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001432233525995-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000143s00011185.1PF08263.7LRRNT_231673.20E-08
Glyur000143s00011185.1PF00560.28LRR_1981190.98
Glyur000143s00011185.1PF00560.28LRR_11211401
Glyur000143s00011185.1PF13855.1LRR_81442012.20E-07
Glyur000143s00011185.1PF00069.20Pkinase3345965.40E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.203
SRR1783600control20.443
SRR1783602moderate drought stress10.572
SRR1811619moderate drought stress10.540

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.270
DRR006520Root Summer glycyrrhizin high producing strain22.701
DRR006521Root Winter glycyrrhizin high producing strain0.410
DRR006522Root Winter glycyrrhizin high producing strain0.433
DRR006523Root Summer glycyrrhizin low producing strain10.575
DRR006524Root Summer glycyrrhizin low producing strain10.645
DRR006525Leaf Summer glycyrrhizin high producing strain1.710
DRR006526Leaf Summer glycyrrhizin high producing strain1.669

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.098
SRR2868004Drought Stress(Tissue:root)11.797
SRR2967015Control (Tissue:root)15.612

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.048
SRR9715740Leave0.296
SRR9715741Leave0.893
SRR9715739Root15.947
SRR9715742Root13.193
SRR9715743Root12.896

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.131
SRR8749028MeJA induced 9h0.701
SRR8749029MeJA induced 9h0.719
SRR8749030Uninduced0.020
SRR8749031Uninduced0.000
SRR8749032Uninduced0.106

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.946
SRR8400027Control-Root31.657

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved