Gene detail information of Glyur000143s00011187.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23730.12.00E-125Galactose mutarotase-like superfamily protein
NRXP_004511533.10PREDICTED: putative glucose-6-phosphate 1-epimerase-like [Cicer arietinum]
COGYP_002355684.12.00E-62aldose 1-epimerase [Thauera sp. MZ1T]
Swissprottr|Q40784|AAPC_CENCI2.00E-140Putative glucose-6-phosphate 1-epimerase
trEMBLtr|G7KAP1|G7KAP1_MEDTR0Glucose-6-phosphate 1-epimerase-like protein {ECO:0000313|EMBL:AES93987.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001433022632484-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01792E5.1.3.15 EC:5.1.3.15 Glycolysis / Gluconeogenesis map00010


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0016853  isomerase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000143s00011187.1PF01263.15Aldose_epim102703.90E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.633
SRR1783600control0.690
SRR1783602moderate drought stress0.824
SRR1811619moderate drought stress1.048

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.180
DRR006520Root Summer glycyrrhizin high producing strain6.160
DRR006521Root Winter glycyrrhizin high producing strain0.483
DRR006522Root Winter glycyrrhizin high producing strain0.602
DRR006523Root Summer glycyrrhizin low producing strain8.661
DRR006524Root Summer glycyrrhizin low producing strain8.053
DRR006525Leaf Summer glycyrrhizin high producing strain8.913
DRR006526Leaf Summer glycyrrhizin high producing strain8.585

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.869
SRR2868004Drought Stress(Tissue:root)4.253
SRR2967015Control (Tissue:root)7.596

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.283
SRR9715740Leave8.898
SRR9715741Leave9.879
SRR9715739Root0.337
SRR9715742Root2.262
SRR9715743Root1.779

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.244
SRR8749028MeJA induced 9h0.350
SRR8749029MeJA induced 9h1.805
SRR8749030Uninduced4.018
SRR8749031Uninduced8.754
SRR8749032Uninduced11.879

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.197
SRR8400027Control-Root2.771

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved