Gene detail information of Glyur000143s00011203.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G64060.10respiratory burst oxidase protein F
NRXP_003517484.10PREDICTED: respiratory burst oxidase homolog protein A-like isoform 1 [Glycine max]
COGYP_007146260.11.00E-83putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprottr|O48538|RBOHF_ARATH0Respiratory burst oxidase homolog protein F
trEMBLtr|I1JAA1|I1JAA1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G43190.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00143123005131474-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13447RBOH EC:1.6.3.- 1.11.1.- MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


cellular_component

GO:0016020  membrane


molecular_function

GO:0004601  peroxidase activity

GO:0005509  calcium ion binding

GO:0016491  oxidoreductase activity

GO:0050664  oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000143s00011203.1PF08414.5NADPH_Ox1452443.20E-40
Glyur000143s00011203.1PF01794.14Ferric_reduct4045602.90E-17
Glyur000143s00011203.1PF08022.7FAD_binding_86047164.30E-31
Glyur000143s00011203.1PF08030.7NAD_binding_67239099.00E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.922
SRR1783600control9.987
SRR1783602moderate drought stress10.140
SRR1811619moderate drought stress10.112

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.270
DRR006520Root Summer glycyrrhizin high producing strain8.245
DRR006521Root Winter glycyrrhizin high producing strain33.272
DRR006522Root Winter glycyrrhizin high producing strain32.323
DRR006523Root Summer glycyrrhizin low producing strain14.291
DRR006524Root Summer glycyrrhizin low producing strain14.254
DRR006525Leaf Summer glycyrrhizin high producing strain22.454
DRR006526Leaf Summer glycyrrhizin high producing strain22.524

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)56.129
SRR2868004Drought Stress(Tissue:root)66.786
SRR2967015Control (Tissue:root)54.872

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave93.496
SRR9715740Leave103.388
SRR9715741Leave114.245
SRR9715739Root6.457
SRR9715742Root44.852
SRR9715743Root35.560

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h56.357
SRR8749028MeJA induced 9h73.632
SRR8749029MeJA induced 9h48.802
SRR8749030Uninduced46.260
SRR8749031Uninduced34.162
SRR8749032Uninduced22.617

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.694
SRR8400027Control-Root24.728

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved