Gene detail information of Glyur000143s00011225.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G11350.1 | 0 | Protein of unknown function (DUF604) |
| NR | AES94027.2 | 0 | transferring glycosyl group transferase [Medicago truncatula] |
| trEMBL | tr|G7KC11|G7KC11_MEDTR | 0 | Transferring glycosyl group transferase {ECO:0000313|EMBL:AES94027.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00143 | 239507 | 242988 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000143s00011225.1 | PF04646.7 | DUF604 | 189 | 440 | 5.90E-112 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.293 |
| SRR1783600 | control | 2.741 |
| SRR1783602 | moderate drought stress | 2.576 |
| SRR1811619 | moderate drought stress | 2.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.446 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.354 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.233 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.075 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.463 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.616 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.272 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.550 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.449 |
| SRR2967015 | Control (Tissue:root) | 1.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.934 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.267 |
| SRR9715739 | Root | 1.742 |
| SRR9715742 | Root | 2.617 |
| SRR9715743 | Root | 2.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.050 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.650 |
| SRR8400027 | Control-Root | 6.588 |