Gene detail information of Glyur000143s00011226.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41410.1 | 7.00E-84 | POX (plant homeobox) family protein |
| NR | XP_007158519.1 | 0 | hypothetical protein PHAVU_002G159000g [Phaseolus vulgaris] |
| Swissprot | tr|Q38897|BEL1_ARATH | 3.00E-127 | Homeobox protein BEL1 homolog |
| trEMBL | tr|V7CMC5|V7CMC5_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW30513.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00143 | 252852 | 258393 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000143s00011226.3 | PF07526.6 | POX | 255 | 386 | 2.00E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.565 |
| SRR1783600 | control | 3.614 |
| SRR1783602 | moderate drought stress | 4.564 |
| SRR1811619 | moderate drought stress | 4.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.741 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.761 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.406 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.080 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.039 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 52.215 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.872 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.187 |
| SRR2967015 | Control (Tissue:root) | 25.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 38.145 |
| SRR9715740 | Leave | 57.445 |
| SRR9715741 | Leave | 51.741 |
| SRR9715739 | Root | 4.890 |
| SRR9715742 | Root | 7.769 |
| SRR9715743 | Root | 7.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.014 |
| SRR8749028 | MeJA induced 9h | 5.253 |
| SRR8749029 | MeJA induced 9h | 3.182 |
| SRR8749030 | Uninduced | 2.582 |
| SRR8749031 | Uninduced | 1.400 |
| SRR8749032 | Uninduced | 2.632 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.379 |
| SRR8400027 | Control-Root | 6.366 |