Gene detail information of Glyur000144s00012210.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G47210.16.00E-145myb-like transcription factor family protein
NRXP_007163204.10hypothetical protein PHAVU_001G214900g [Phaseolus vulgaris]
trEMBLtr|V7D0P0|V7D0P0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW35198.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001445698264786-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006281  DNA repair

GO:0006338  chromatin remodeling

GO:0043967  histone H4 acetylation

GO:0043968  histone H2A acetylation

GO:0045892  negative regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus

GO:0035267  NuA4 histone acetyltransferase complex


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000144s00012210.1PF00249.26Myb_DNA-binding1201626.80E-06
Glyur000144s00012210.1PF05499.7DMAP13073695.70E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.475
SRR1783600control8.364
SRR1783602moderate drought stress8.969
SRR1811619moderate drought stress8.879

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.188
DRR006520Root Summer glycyrrhizin high producing strain12.395
DRR006521Root Winter glycyrrhizin high producing strain20.502
DRR006522Root Winter glycyrrhizin high producing strain20.135
DRR006523Root Summer glycyrrhizin low producing strain23.673
DRR006524Root Summer glycyrrhizin low producing strain23.780
DRR006525Leaf Summer glycyrrhizin high producing strain3.232
DRR006526Leaf Summer glycyrrhizin high producing strain3.197

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.209
SRR2868004Drought Stress(Tissue:root)9.994
SRR2967015Control (Tissue:root)10.915

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.799
SRR9715740Leave5.469
SRR9715741Leave4.473
SRR9715739Root2.993
SRR9715742Root7.529
SRR9715743Root7.129

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.436
SRR8749028MeJA induced 9h6.252
SRR8749029MeJA induced 9h7.973
SRR8749030Uninduced7.393
SRR8749031Uninduced4.487
SRR8749032Uninduced2.398

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.625
SRR8400027Control-Root10.309

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved