Gene detail information of Glyur000144s00012214.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G02400.11.00E-106gibberellin 2-oxidase 6
NRXP_003518697.10PREDICTED: gibberellin 2-beta-dioxygenase 2-like [Glycine max]
COGYP_004572412.12.00E-22oxidoreductase [Microlunatus phosphovorus NM-1]
Swissprottr|Q9XHM5|G2OX2_PEA0Gibberellin 2-beta-dioxygenase 2
trEMBLtr|I1JBD7|I1JBD7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G01330.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001447702980734+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04125E1.14.11.13 EC:1.14.11.13 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000144s00012214.1PF14226.1DIOX_N23923.70E-16
Glyur000144s00012214.1PF03171.152OG-FeII_Oxy1753051.50E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.024
SRR1783600control1.992
SRR1783602moderate drought stress1.063
SRR1811619moderate drought stress1.232

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.040
DRR006520Root Summer glycyrrhizin high producing strain2.273
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.723
DRR006524Root Summer glycyrrhizin low producing strain1.960
DRR006525Leaf Summer glycyrrhizin high producing strain0.394
DRR006526Leaf Summer glycyrrhizin high producing strain0.326

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.691
SRR2868004Drought Stress(Tissue:root)7.164
SRR2967015Control (Tissue:root)5.939

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.994
SRR9715740Leave1.213
SRR9715741Leave2.894
SRR9715739Root0.944
SRR9715742Root1.675
SRR9715743Root1.469

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.117
SRR8749028MeJA induced 9h3.108
SRR8749029MeJA induced 9h9.990
SRR8749030Uninduced0.893
SRR8749031Uninduced0.139
SRR8749032Uninduced0.922

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.661
SRR8400027Control-Root6.617

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved