Gene detail information of Glyur000144s00012229.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26751.10shaggy-related kinase 11
NRKHN00229.10Glycogen synthase kinase-3 like MsK-3 [Glycine soja]
COGYP_008149401.11.00E-24hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|P51138|MSK2_MEDSA0Glycogen synthase kinase-3 homolog MsK-2
trEMBLtr|I1JBC5|I1JBC5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G01220.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00144172852177007-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000144s00012229.1PF00069.20Pkinase803581.10E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control44.686
SRR1783600control44.788
SRR1783602moderate drought stress49.131
SRR1811619moderate drought stress48.794

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.548
DRR006520Root Summer glycyrrhizin high producing strain30.755
DRR006521Root Winter glycyrrhizin high producing strain59.142
DRR006522Root Winter glycyrrhizin high producing strain58.222
DRR006523Root Summer glycyrrhizin low producing strain41.038
DRR006524Root Summer glycyrrhizin low producing strain40.259
DRR006525Leaf Summer glycyrrhizin high producing strain12.017
DRR006526Leaf Summer glycyrrhizin high producing strain12.122

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.936
SRR2868004Drought Stress(Tissue:root)69.127
SRR2967015Control (Tissue:root)80.795

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave43.552
SRR9715740Leave38.718
SRR9715741Leave47.270
SRR9715739Root22.422
SRR9715742Root36.814
SRR9715743Root34.981

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.435
SRR8749028MeJA induced 9h48.971
SRR8749029MeJA induced 9h58.990
SRR8749030Uninduced44.507
SRR8749031Uninduced88.511
SRR8749032Uninduced90.778

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root82.996
SRR8400027Control-Root80.700

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved