Gene detail information of Glyur000145s00010142.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G07650.10Leucine-rich repeat transmembrane protein kinase
NRAET00430.20LRR receptor-like kinase [Medicago truncatula]
COGYP_004775215.12.00E-33RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGE0|Y1765_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g07650 (Precursor)
trEMBLtr|G7K3F2|G7K3F2_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AET00430.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00145151924162634+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1
Carbohydrate-Active enzymes FamilyCBM57


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000145s00010142.1PF13516.1LRR_61611820.84
Glyur000145s00010142.1PF13855.1LRR_82583171.20E-07
Glyur000145s00010142.1PF11721.3Malectin3905761.90E-52
Glyur000145s00010142.1PF07714.12Pkinase_Tyr6558102.00E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.114
SRR1783600control4.285
SRR1783602moderate drought stress5.070
SRR1811619moderate drought stress4.811

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.787
DRR006520Root Summer glycyrrhizin high producing strain8.015
DRR006521Root Winter glycyrrhizin high producing strain13.009
DRR006522Root Winter glycyrrhizin high producing strain12.984
DRR006523Root Summer glycyrrhizin low producing strain19.306
DRR006524Root Summer glycyrrhizin low producing strain18.132
DRR006525Leaf Summer glycyrrhizin high producing strain3.503
DRR006526Leaf Summer glycyrrhizin high producing strain3.495

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.639
SRR2868004Drought Stress(Tissue:root)8.753
SRR2967015Control (Tissue:root)14.626

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.261
SRR9715740Leave5.813
SRR9715741Leave9.887
SRR9715739Root1.852
SRR9715742Root4.297
SRR9715743Root4.431

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.107
SRR8749028MeJA induced 9h4.679
SRR8749029MeJA induced 9h4.318
SRR8749030Uninduced6.361
SRR8749031Uninduced5.411
SRR8749032Uninduced4.128

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.972
SRR8400027Control-Root8.131

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved