Gene detail information of Glyur000145s00010145.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30920.12.00E-92coenzyme Q 3
NRXP_003617468.16.44E-149Hexaprenyldihydroxybenzoate methyltransferase [Medicago truncatula]
COGYP_916372.19.00E-693-demethylubiquinone-9 3-methyltransferase [Paracoccus denitrificans PD1222]
Swissprottr|O49354|COQ3_ARATH5.00E-113Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial (Precursor)
trEMBLtr|G7K3E9|G7K3E9_MEDTR2.00E-1493-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:AET00427.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00145169374173728-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00591COQ3 EC:2.1.1.114 2.1.1.64 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0006744  ubiquinone biosynthetic process


molecular_function

GO:0008425  2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000145s00010145.1PF13489.1Methyltransf_231042293.70E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.138
SRR1783600control20.258
SRR1783602moderate drought stress36.009
SRR1811619moderate drought stress36.259

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.771
DRR006520Root Summer glycyrrhizin high producing strain16.556
DRR006521Root Winter glycyrrhizin high producing strain45.514
DRR006522Root Winter glycyrrhizin high producing strain45.193
DRR006523Root Summer glycyrrhizin low producing strain19.668
DRR006524Root Summer glycyrrhizin low producing strain22.057
DRR006525Leaf Summer glycyrrhizin high producing strain11.695
DRR006526Leaf Summer glycyrrhizin high producing strain11.485

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.419
SRR2868004Drought Stress(Tissue:root)11.630
SRR2967015Control (Tissue:root)12.506

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.388
SRR9715740Leave8.432
SRR9715741Leave8.558
SRR9715739Root6.925
SRR9715742Root7.748
SRR9715743Root5.806

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.834
SRR8749028MeJA induced 9h9.372
SRR8749029MeJA induced 9h15.699
SRR8749030Uninduced8.122
SRR8749031Uninduced5.285
SRR8749032Uninduced9.538

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.148
SRR8400027Control-Root8.200

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved