Gene detail information of Glyur000145s00010146.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58760.13.00E-170Integrin-linked protein kinase family
NRXP_004491350.10PREDICTED: serine/threonine-protein kinase TNNI3K-like [Cicer arietinum]
COGYP_006592168.18.00E-24protein kinase [Methylocystis sp. SC2]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-39Serine/threonine-protein kinase HT1
trEMBLtr|G7K3E6|G7K3E6_MEDTR0Integrin-linked kinase family protein {ECO:0000313|EMBL:AET00424.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00145178912183224+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000145s00010146.2PF00069.20Pkinase82212.40E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.528
SRR1783600control2.531
SRR1783602moderate drought stress3.605
SRR1811619moderate drought stress3.636

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.686
DRR006520Root Summer glycyrrhizin high producing strain5.502
DRR006521Root Winter glycyrrhizin high producing strain38.097
DRR006522Root Winter glycyrrhizin high producing strain36.980
DRR006523Root Summer glycyrrhizin low producing strain2.362
DRR006524Root Summer glycyrrhizin low producing strain2.392
DRR006525Leaf Summer glycyrrhizin high producing strain16.834
DRR006526Leaf Summer glycyrrhizin high producing strain17.936

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.574
SRR2868004Drought Stress(Tissue:root)19.143
SRR2967015Control (Tissue:root)24.356

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.062
SRR9715740Leave19.572
SRR9715741Leave19.060
SRR9715739Root2.025
SRR9715742Root5.926
SRR9715743Root6.097

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.961
SRR8749028MeJA induced 9h16.701
SRR8749029MeJA induced 9h13.385
SRR8749030Uninduced17.032
SRR8749031Uninduced9.953
SRR8749032Uninduced10.260

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.044
SRR8400027Control-Root13.319

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved