Gene detail information of Glyur000145s00010151.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58790.1 | 2.00E-143 | galacturonosyltransferase 15 |
| NR | XP_003551912.1 | 0 | PREDICTED: probable galacturonosyltransferase 15-like [Glycine max] |
| Swissprot | tr|Q8L4B0|GAUTF_ARATH | 0 | Probable galacturonosyltransferase 15 |
| trEMBL | tr|K7MR54|K7MR54_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G12604.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00145 | 240534 | 247739 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT8 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000145s00010151.2 | PF01501.15 | Glyco_transf_8 | 119 | 422 | 7.40E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.545 |
| SRR1783600 | control | 10.163 |
| SRR1783602 | moderate drought stress | 6.090 |
| SRR1811619 | moderate drought stress | 6.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.529 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.551 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.430 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.358 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.340 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.346 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.342 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.203 |
| SRR2967015 | Control (Tissue:root) | 1.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.150 |
| SRR9715740 | Leave | 0.857 |
| SRR9715741 | Leave | 1.316 |
| SRR9715739 | Root | 3.274 |
| SRR9715742 | Root | 8.103 |
| SRR9715743 | Root | 6.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.449 |
| SRR8749028 | MeJA induced 9h | 3.310 |
| SRR8749029 | MeJA induced 9h | 3.250 |
| SRR8749030 | Uninduced | 0.691 |
| SRR8749031 | Uninduced | 0.257 |
| SRR8749032 | Uninduced | 1.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.239 |
| SRR8400027 | Control-Root | 16.074 |