Gene detail information of Glyur000145s00010157.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27490.2 | 8.00E-26 | dephospho-CoA kinase family |
| NR | ACU19930.1 | 2.52E-40 | unknown [Glycine max] |
| COG | NP_847031.1 | 4.00E-10 | dephospho-CoA kinase [Bacillus anthracis str. Ames] |
| Swissprot | tr|Q9ZQH0|COAE_ARATH | 1.00E-32 | Dephospho-CoA kinase |
| trEMBL | tr|C6TDM8|C6TDM8_SOYBN | 9.00E-41 | Uncharacterized protein {ECO:0000313|EMBL:ACU19930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00145 | 275314 | 275978 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00859 | coaE | EC:2.7.1.24 | Pantothenate and CoA biosynthesis | map00770 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000145s00010157.1 | PF01121.15 | CoaE | 3 | 36 | 4.60E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.543 |
| SRR1783600 | control | 0.477 |
| SRR1783602 | moderate drought stress | 0.088 |
| SRR1811619 | moderate drought stress | 0.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.250 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.219 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.104 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.061 |
| SRR9715739 | Root | 0.224 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.550 |
| SRR8400027 | Control-Root | 0.234 |