Gene detail information of Glyur000147s00013836.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66250.10O-Glycosyl hydrolases family 17 protein
NRXP_007141916.10hypothetical protein PHAVU_008G236700g [Phaseolus vulgaris]
Swissprottr|Q9C7U5|E132_ARATH0Glucan endo-1,3-beta-glucosidase 2 (Precursor)
trEMBLtr|K7M8E9|K7M8E9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G39510.2} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001475278055922-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17,CBM43


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19891GN1_2_3 EC:3.2.1.39 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000147s00013836.1PF00332.13Glyco_hydro_17243439.40E-91
Glyur000147s00013836.1PF07983.8X83614135.30E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control22.813
SRR1783600control23.546
SRR1783602moderate drought stress14.337
SRR1811619moderate drought stress14.295

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.688
DRR006520Root Summer glycyrrhizin high producing strain20.048
DRR006521Root Winter glycyrrhizin high producing strain0.205
DRR006522Root Winter glycyrrhizin high producing strain0.167
DRR006523Root Summer glycyrrhizin low producing strain7.847
DRR006524Root Summer glycyrrhizin low producing strain7.617
DRR006525Leaf Summer glycyrrhizin high producing strain3.333
DRR006526Leaf Summer glycyrrhizin high producing strain3.239

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.735
SRR2868004Drought Stress(Tissue:root)5.845
SRR2967015Control (Tissue:root)7.777

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.293
SRR9715740Leave2.081
SRR9715741Leave1.735
SRR9715739Root10.327
SRR9715742Root6.472
SRR9715743Root5.662

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.736
SRR8749028MeJA induced 9h7.476
SRR8749029MeJA induced 9h13.765
SRR8749030Uninduced1.065
SRR8749031Uninduced0.177
SRR8749032Uninduced1.180

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.481
SRR8400027Control-Root23.540

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved