Gene detail information of Glyur000147s00013842.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G48480.13.00E-165receptor-like kinase 1
NRXP_003616273.10Leucine-rich repeat transmembrane protein [Medicago truncatula]
COGYP_004579826.12.00E-24hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|Q9LP77|Y1848_ARATH0Probable inactive receptor kinase At1g48480 (Precursor)
trEMBLtr|G7K1N3|G7K1N3_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES99231.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00147104925108501-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000147s00013842.1PF08263.7LRRNT_225614.10E-07
Glyur000147s00013842.1PF00560.28LRR_11361580.22
Glyur000147s00013842.1PF00560.28LRR_11852041
Glyur000147s00013842.1PF00069.20Pkinase3426001.60E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.342
SRR1783600control21.346
SRR1783602moderate drought stress12.608
SRR1811619moderate drought stress12.638

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.146
DRR006520Root Summer glycyrrhizin high producing strain22.686
DRR006521Root Winter glycyrrhizin high producing strain0.812
DRR006522Root Winter glycyrrhizin high producing strain0.791
DRR006523Root Summer glycyrrhizin low producing strain15.413
DRR006524Root Summer glycyrrhizin low producing strain15.531
DRR006525Leaf Summer glycyrrhizin high producing strain10.130
DRR006526Leaf Summer glycyrrhizin high producing strain10.199

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.119
SRR2868004Drought Stress(Tissue:root)26.131
SRR2967015Control (Tissue:root)23.696

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.200
SRR9715740Leave5.125
SRR9715741Leave5.355
SRR9715739Root30.957
SRR9715742Root24.796
SRR9715743Root25.116

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.918
SRR8749028MeJA induced 9h5.926
SRR8749029MeJA induced 9h4.276
SRR8749030Uninduced1.225
SRR8749031Uninduced0.197
SRR8749032Uninduced0.829

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.458
SRR8400027Control-Root40.700

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved