Gene detail information of Glyur000147s00013849.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G37600.18.00E-174glutamine synthase clone R1
NRP32289.10RecName: Full=Glutamine synthetase nodule isozyme; Short=GS; AltName: Full=Glutamate--ammonia ligase [Vigna aconitifolia]
COGYP_008733525.13.00E-100glutamate--ammonia ligase [Actinoplanes friuliensis DSM 7358]
Swissprottr|P32289|GLNA_VIGAC0Glutamine synthetase nodule isozyme
trEMBLtr|Q9FUK4|Q9FUK4_SOYBN0Glutamine synthetase {ECO:0000256|RuleBase:RU004356}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00147148801153493+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01915glnA, GLUL EC:6.3.1.2 Biosynthesis of amino acids map01230
Glyoxylate and dicarboxylate metabolismmap00630
Nitrogen metabolismmap00910
Alanine, aspartate and glutamate metabolismmap00250
Arginine biosynthesismap00220
Two-component systemmap02020
Glutamatergic synapsemap04724
GABAergic synapsemap04727


Gene Ontology

biological_process

GO:0006542  glutamine biosynthetic process

GO:0006807  nitrogen compound metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004356  glutamate-ammonia ligase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000147s00013849.1PF03951.14Gln-synt_N20982.60E-18
Glyur000147s00013849.1PF00120.19Gln-synt_C1053424.20E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.518
SRR1783600control21.374
SRR1783602moderate drought stress26.152
SRR1811619moderate drought stress25.993

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.458
DRR006520Root Summer glycyrrhizin high producing strain29.987
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain35.188
DRR006524Root Summer glycyrrhizin low producing strain35.614
DRR006525Leaf Summer glycyrrhizin high producing strain7.469
DRR006526Leaf Summer glycyrrhizin high producing strain7.392

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.827
SRR2868004Drought Stress(Tissue:root)4.777
SRR2967015Control (Tissue:root)3.503

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.118
SRR9715740Leave19.599
SRR9715741Leave22.082
SRR9715739Root44.209
SRR9715742Root110.815
SRR9715743Root102.870

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.337
SRR8749028MeJA induced 9h0.725
SRR8749029MeJA induced 9h1.101
SRR8749030Uninduced0.571
SRR8749031Uninduced0.317
SRR8749032Uninduced1.176

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.750
SRR8400027Control-Root12.070

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved