Gene detail information of Glyur000147s00013876.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66150.11.00E-169transmembrane kinase 1
NRCBI26796.30unnamed protein product [Vitis vinifera]
COGYP_006914168.13.00E-19Serine/threonine protein kinase PrkC, regulator of stationary phase [Dehalobacter sp. CF]
Swissprottr|P43298|TMK1_ARATH0Probable receptor protein kinase TMK1 (Precursor)
trEMBLtr|C6ZRR4|C6ZRR4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G39290.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00147267249270708-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000147s00013876.1PF08263.7LRRNT_235701.30E-05
Glyur000147s00013876.1PF08263.7LRRNT_23573760.019
Glyur000147s00013876.1PF12799.2LRR_44024392.40E-07
Glyur000147s00013876.1PF00069.20Pkinase5587922.60E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.681
SRR1783600control4.441
SRR1783602moderate drought stress5.771
SRR1811619moderate drought stress5.862

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.074
DRR006520Root Summer glycyrrhizin high producing strain2.164
DRR006521Root Winter glycyrrhizin high producing strain0.042
DRR006522Root Winter glycyrrhizin high producing strain0.041
DRR006523Root Summer glycyrrhizin low producing strain1.000
DRR006524Root Summer glycyrrhizin low producing strain1.015
DRR006525Leaf Summer glycyrrhizin high producing strain8.681
DRR006526Leaf Summer glycyrrhizin high producing strain8.428

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.681
SRR2868004Drought Stress(Tissue:root)17.183
SRR2967015Control (Tissue:root)20.820

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.848
SRR9715740Leave1.449
SRR9715741Leave2.442
SRR9715739Root10.167
SRR9715742Root5.738
SRR9715743Root6.704

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.183
SRR8749028MeJA induced 9h16.202
SRR8749029MeJA induced 9h14.015
SRR8749030Uninduced37.875
SRR8749031Uninduced10.525
SRR8749032Uninduced7.097

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.217
SRR8400027Control-Root15.564

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved