Gene detail

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Gene detail information of Glyur000148s00009050.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G05510.1	2.00E-144	Phospholipid/glycerol acyltransferase family protein
NR	XP_003626208.1	0	Tafazzin [Medicago truncatula]
COG	YP_873346.1	8.00E-15	phospholipid/glycerol acyltransferase [Acidothermus cellulolyticus 11B]
Swissprot	tr\|Q9ZV87\|NAPES_ARATH	6.00E-32	N-acylphosphatidylethanolamine synthase
trEMBL	tr\|G7KXI7\|G7KXI7_MEDTR	0	Phospholipid/glycerol acyltransferase family protein {ECO:0000313\|EMBL:AES82426.1}

Sequence

Transcript Sequence

>Glyur000148s00009050.1
ATAATTCATTATTATATTTTCTTTTTCTAATTAATACAAAGCCGTAAGCTAGGGCGTACGTATATCCTACAGAAACCCACAAGTCAAGAAGCGTGGTGGAATTTGATGCAGCCCATTGTTTTCTCGCTCTACACTCGCGCTTTACTACCTGAGAGCTTTGCAACGAACTAGTAATCGTTTATTTTCAACCAAAAACACACACACACACACACACACACACCATAATTCTCTTCCCTTGAGATTTCTCTCCTTTTCCGTTTTATTCACCGATGCACCGTCTCGATCGCGGTGATGTTTGGAAGAGCAAGGCTCAATCCCTGCAGCTGCAGCTCAGGGACCGCTTCAGAGTCGCCGTCGACCGCCATTGGCGCCGCCGCCACACGCTCATCCCCTCCGCCGATCCCGACGGTTACGTCTCCTCCACCCTTCAGCGNTGGCTCAGCCGATTTCGTGATTTCCGTAGGGACTCCTTGCCTTCTTCCACCTCTTTCTATCGCAAACGAGTGACTAAGGATTTCAGTTCGGAGGAAGATTCAACTCTTCTTCGTGTGATGCAAGCTGTTGCTGTTCCNATTCTCGGAAATGTCTGTCACGTGTTTATGAATGGATTAAATCGTGTTCAGGTCAGCAACCATGTTGCTTCCATGGATGATCCACTTGTCATTGCTTCGTTGCTTCCTCCACAAGTTCTTTTGGATGCTAAGAATCTCAGATGGACACTTTGTGCAACTGATAGATGTTTTAAAAACCCTGTAACTTCTGCATTCTTTCGATCTGTCAAAGTCTTGCCTGTTTCGCGGGGTGATGGAATTTATCAGGAGGGAATGGACATGGCCATTTCGAAATTGAACAATGGTGGTTGGGTCCACATATTCCCAGAAGGTAGTCGCTCCCGGGACGGTGGAAAAACCATGGGCTCTTCCAAGAGAGGTGTTGCCAGGTTGGTCCTTGATGGAGATAGCATGCCCGTTGTTGTCCCCTTTGTACATACAGGGATGCAGGAGATTATGCCAATAGGTGCCAGCTTTCCCAGAATTGGAAAGATGGTTACGGTAATCGTGGGTGATCCTATCAATTTTGACGATATACTCAGCATGGAAAAAGGCACGGAAGTGCCAAGAAAAAGACTGTATGATGCAGTAGCGGCAAGAATTGGTGATCGATTACGGGAACTGAAGGCCCAAGTTGACACTTTAGCAATGGAACAAGAAATGCAGCTACAAGATCACTCCTCACACAGCATCGAACGAGCATCTGGAATCTTGCAGCAGGTTGATTGGGAATTATTTGGAATGGATAGCTTCATATCTTCCGTGGATGATGATTCCAAGCAGAGACGAGAAACAGTTGTCCTCCCAAATACAAGTGTTTNTGAGCAGCATCAGCAATCTCATAACAAGAGAGTGGGTTTCTCATACAGGATGCGTGGTTATATGGATCAGATGGAACTCATGTCTTTTGCTGCTAGAGGCTTATTTATGAATAATAATGAAACTAGGTACTCTGTTGGCTTTAGTAGAGAGATAGGCCCCTTGAAGGCATGGAAACAGTTTTTCGAAGCTAATCTATTACGGCAGTGGAATTAGGGTGTAAATTCAAATCTTTGGTTCTTGATTGANATAATTCAATAGATTTTGTTAGATAAACAGTTAAACGTAGTAGAATTGCCGAGAATCTGTAACTAAAATAGCTAATTTTAGTTTAGTTGTTTGATTACTTTAAGTGGCGGGATGGAACTATGAAAGGCAGTTTGGTCCTTAAGGGAGGACAGAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00148	120382	124605	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13511	TAZ	EC:2.3.1.-	Glycerophospholipid metabolism	map00564

Gene Ontology

biological_process

GO:0006644 phospholipid metabolic process

GO:0008152 metabolic process

molecular_function GO:0016746 transferase activity, transferring acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000148s00009050.1	PF01553.16	Acyltransferase	115	240	2.70E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.160
SRR1783600	control	7.916
SRR1783602	moderate drought stress	6.438
SRR1811619	moderate drought stress	6.279

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.327
DRR006520	Root Summer glycyrrhizin high producing strain	24.406
DRR006521	Root Winter glycyrrhizin high producing strain	57.048
DRR006522	Root Winter glycyrrhizin high producing strain	54.884
DRR006523	Root Summer glycyrrhizin low producing strain	14.108
DRR006524	Root Summer glycyrrhizin low producing strain	13.999
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.979
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.647

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	8.621
SRR2868004	Drought Stress(Tissue:root)	10.436
SRR2967015	Control (Tissue:root)	17.922

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	5.958
SRR9715740	Leave	9.506
SRR9715741	Leave	9.206
SRR9715739	Root	3.938
SRR9715742	Root	10.620
SRR9715743	Root	10.433

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.546
SRR8749028	MeJA induced 9h	38.782
SRR8749029	MeJA induced 9h	39.790
SRR8749030	Uninduced	17.090
SRR8749031	Uninduced	16.388
SRR8749032	Uninduced	21.461

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	9.539
SRR8400027	Control-Root	8.576