Gene detail information of Glyur000148s00009060.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G27650.13.00E-171Tudor/PWWP/MBT superfamily protein
NRXP_004494605.10PREDICTED: microtubule-associated protein futsch-like [Cicer arietinum]
Swissprottr|Q9M3G7|ATM_ARATH4.00E-07Serine/threonine-protein kinase ATM
trEMBLtr|K7MZX8|K7MZX8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G42260.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00148188747194059-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17398DNMT3A EC:2.1.1.37 Cysteine and methionine metabolism map00270
MicroRNAs in cancermap05206


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000148s00009060.1PF00855.12PWWP1252102.70E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.927
SRR1783600control16.089
SRR1783602moderate drought stress19.362
SRR1811619moderate drought stress19.089

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.474
DRR006520Root Summer glycyrrhizin high producing strain15.358
DRR006521Root Winter glycyrrhizin high producing strain11.305
DRR006522Root Winter glycyrrhizin high producing strain10.943
DRR006523Root Summer glycyrrhizin low producing strain16.276
DRR006524Root Summer glycyrrhizin low producing strain16.066
DRR006525Leaf Summer glycyrrhizin high producing strain9.806
DRR006526Leaf Summer glycyrrhizin high producing strain9.792

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.997
SRR2868004Drought Stress(Tissue:root)17.589
SRR2967015Control (Tissue:root)19.295

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.321
SRR9715740Leave11.818
SRR9715741Leave15.091
SRR9715739Root6.290
SRR9715742Root17.063
SRR9715743Root15.201

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.063
SRR8749028MeJA induced 9h11.530
SRR8749029MeJA induced 9h6.451
SRR8749030Uninduced7.062
SRR8749031Uninduced7.828
SRR8749032Uninduced7.586

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.541
SRR8400027Control-Root15.786

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved