Gene detail information of Glyur000148s00009066.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09020.10homolog of yeast sucrose nonfermenting 4
NRXP_004494610.10PREDICTED: sucrose nonfermenting 4-like protein-like isoform X2 [Cicer arietinum]
Swissprottr|Q944A6|SNF4_ARATH0Sucrose nonfermenting 4-like protein
trEMBLtr|I1JRB8|I1JRB8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G39690.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00148236841243749+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000148s00009066.1PF00571.23CBS3313743.30E-06
Glyur000148s00009066.1PF00571.23CBS4144632.80E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.129
SRR1783600control12.306
SRR1783602moderate drought stress15.712
SRR1811619moderate drought stress15.658

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.701
DRR006520Root Summer glycyrrhizin high producing strain15.944
DRR006521Root Winter glycyrrhizin high producing strain24.355
DRR006522Root Winter glycyrrhizin high producing strain24.028
DRR006523Root Summer glycyrrhizin low producing strain16.613
DRR006524Root Summer glycyrrhizin low producing strain16.999
DRR006525Leaf Summer glycyrrhizin high producing strain8.562
DRR006526Leaf Summer glycyrrhizin high producing strain8.380

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.340
SRR2868004Drought Stress(Tissue:root)38.867
SRR2967015Control (Tissue:root)38.650

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.052
SRR9715740Leave19.509
SRR9715741Leave25.062
SRR9715739Root8.344
SRR9715742Root16.073
SRR9715743Root14.413

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.956
SRR8749028MeJA induced 9h11.093
SRR8749029MeJA induced 9h8.719
SRR8749030Uninduced10.075
SRR8749031Uninduced9.159
SRR8749032Uninduced8.803

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.211
SRR8400027Control-Root28.537

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved