Gene detail information of Glyur000148s00009074.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05380.5 | 5.00E-79 | DIRP ;Myb-like DNA-binding domain |
| NR | KHN16118.1 | 0 | Protein ALWAYS EARLY 3 [Glycine soja] |
| Swissprot | tr|Q6A333|ALY2_ARATH | 1.00E-107 | Protein ALWAYS EARLY 2 |
| trEMBL | tr|K7LJK9|K7LJK9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G29481.6} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00148 | 270498 | 275231 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000148s00009074.1 | PF00249.26 | Myb_DNA-binding | 46 | 82 | 6.60E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.998 |
| SRR1783600 | control | 6.080 |
| SRR1783602 | moderate drought stress | 5.876 |
| SRR1811619 | moderate drought stress | 5.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.370 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.039 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.168 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.943 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.815 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.854 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.447 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.758 |
| SRR2967015 | Control (Tissue:root) | 13.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.346 |
| SRR9715740 | Leave | 5.387 |
| SRR9715741 | Leave | 6.457 |
| SRR9715739 | Root | 0.643 |
| SRR9715742 | Root | 6.989 |
| SRR9715743 | Root | 5.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.563 |
| SRR8749028 | MeJA induced 9h | 16.924 |
| SRR8749029 | MeJA induced 9h | 4.462 |
| SRR8749030 | Uninduced | 2.667 |
| SRR8749031 | Uninduced | 5.709 |
| SRR8749032 | Uninduced | 1.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.708 |
| SRR8400027 | Control-Root | 14.618 |