Gene detail information of Glyur000149s00009544.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63840.19.00E-18Glycosyl hydrolases family 31 protein
NRXP_004502983.13.55E-21PREDICTED: neutral alpha-glucosidase AB-like [Cicer arietinum]
COGYP_002464608.11.00E-08alpha-glucosidase [Chloroflexus aggregans DSM 9485]
Swissprottr|Q9FN05|PSL5_ARATH1.00E-20Probable glucan 1,3-alpha-glucosidase (Precursor)
trEMBLtr|G7JC76|G7JC76_MEDTR2.00E-20Neutral alpha-glucosidase AB {ECO:0000313|EMBL:AES85382.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001492673228821+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH31


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05546GANAB EC:3.2.1.84 N-Glycan biosynthesis map00510
Protein processing in endoplasmic reticulummap04141


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000149s00009544.1PF01055.21Glyco_hydro_3136866.80E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.474
SRR1783600control0.275
SRR1783602moderate drought stress0.360
SRR1811619moderate drought stress0.411

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.477
DRR006520Root Summer glycyrrhizin high producing strain1.377
DRR006521Root Winter glycyrrhizin high producing strain0.694
DRR006522Root Winter glycyrrhizin high producing strain0.557
DRR006523Root Summer glycyrrhizin low producing strain2.155
DRR006524Root Summer glycyrrhizin low producing strain2.147
DRR006525Leaf Summer glycyrrhizin high producing strain1.036
DRR006526Leaf Summer glycyrrhizin high producing strain1.287

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.776
SRR2868004Drought Stress(Tissue:root)0.828
SRR2967015Control (Tissue:root)1.422

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.112
SRR9715740Leave1.288
SRR9715741Leave1.304
SRR9715739Root1.514
SRR9715742Root1.633
SRR9715743Root1.069

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.739
SRR8749028MeJA induced 9h3.155
SRR8749029MeJA induced 9h2.301
SRR8749030Uninduced3.972
SRR8749031Uninduced1.308
SRR8749032Uninduced3.333

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.854
SRR8400027Control-Root0.999

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved