Gene detail information of Glyur000149s00009562.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G19330.10ARM repeat protein interacting with ABF2
NRXP_004493669.10PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Cicer arietinum]
Swissprottr|B9DHT4|ARIA_ARATH0ARM REPEAT PROTEIN INTERACTING WITH ABF2
trEMBLtr|A0A072U240|A0A072U240_MEDTR0ARM repeat protein interacting WITH ABF2 protein {ECO:0000313|EMBL:KEH23764.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00149131014136184-


Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF
Ubiquitin FamilyBTB
Ubiquitin Family3-box


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005488  binding

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000149s00009562.1PF00514.18Arm1872212.00E-06
Glyur000149s00009562.1PF00514.18Arm2542887.60E-06
Glyur000149s00009562.1PF00651.26BTB5516521.50E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.330
SRR1783600control2.386
SRR1783602moderate drought stress1.013
SRR1811619moderate drought stress0.940

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.285
DRR006520Root Summer glycyrrhizin high producing strain2.322
DRR006521Root Winter glycyrrhizin high producing strain0.788
DRR006522Root Winter glycyrrhizin high producing strain0.809
DRR006523Root Summer glycyrrhizin low producing strain1.196
DRR006524Root Summer glycyrrhizin low producing strain1.017
DRR006525Leaf Summer glycyrrhizin high producing strain0.503
DRR006526Leaf Summer glycyrrhizin high producing strain0.410

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.309
SRR2868004Drought Stress(Tissue:root)4.000
SRR2967015Control (Tissue:root)4.810

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.124
SRR9715740Leave0.028
SRR9715741Leave0.500
SRR9715739Root0.511
SRR9715742Root0.918
SRR9715743Root0.410

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.079
SRR8749028MeJA induced 9h3.858
SRR8749029MeJA induced 9h2.223
SRR8749030Uninduced0.366
SRR8749031Uninduced0.391
SRR8749032Uninduced0.566

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.503
SRR8400027Control-Root4.305

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved