Gene detail information of Glyur000150s00014553.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38300.1 | 4.00E-43 | myb-like HTH transcriptional regulator family protein |
| NR | AES79549.2 | 6.92E-108 | MYB-like transcription factor family protein [Medicago truncatula] |
| Swissprot | tr|Q700D9|MYBF_ARATH | 2.00E-28 | Putative Myb family transcription factor At1g14600 |
| trEMBL | tr|G7KSC8|G7KSC8_MEDTR | 3.00E-108 | MYB-like transcription factor family protein {ECO:0000313|EMBL:AES79549.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 28649 | 30664 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| EAR motif-containing Proteins | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014553.1 | PF00249.26 | Myb_DNA-binding | 83 | 134 | 1.60E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.050 |
| SRR1783600 | control | 0.077 |
| SRR1783602 | moderate drought stress | 0.026 |
| SRR1811619 | moderate drought stress | 0.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.872 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 9.785 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.343 |
| SRR2967015 | Control (Tissue:root) | 10.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.832 |
| SRR9715740 | Leave | 1.364 |
| SRR9715741 | Leave | 1.120 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.195 |
| SRR8749028 | MeJA induced 9h | 1.507 |
| SRR8749029 | MeJA induced 9h | 0.017 |
| SRR8749030 | Uninduced | 0.459 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.292 |
| SRR8400027 | Control-Root | 1.305 |