Gene detail information of Glyur000150s00014558.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01570.1 | 8.00E-10 | GRAS family transcription factor family protein |
| NR | KHN40716.1 | 0 | Nodulation-signaling pathway 2 protein [Glycine soja] |
| Swissprot | tr|Q5NE24|NSP2_MEDTR | 2.00E-17 | Nodulation-signaling pathway 2 protein |
| trEMBL | tr|I1N309|I1N309_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G43580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 69226 | 70968 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014558.1 | PF03514.9 | GRAS | 204 | 579 | 2.30E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.314 |
| SRR1783600 | control | 0.344 |
| SRR1783602 | moderate drought stress | 0.246 |
| SRR1811619 | moderate drought stress | 0.258 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.322 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.496 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.866 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.024 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.655 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.786 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.373 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.900 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.012 |
| SRR2967015 | Control (Tissue:root) | 10.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.873 |
| SRR9715740 | Leave | 0.738 |
| SRR9715741 | Leave | 1.538 |
| SRR9715739 | Root | 1.406 |
| SRR9715742 | Root | 2.727 |
| SRR9715743 | Root | 2.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.390 |
| SRR8749028 | MeJA induced 9h | 14.535 |
| SRR8749029 | MeJA induced 9h | 3.000 |
| SRR8749030 | Uninduced | 2.327 |
| SRR8749031 | Uninduced | 1.988 |
| SRR8749032 | Uninduced | 0.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.153 |
| SRR8400027 | Control-Root | 1.628 |