Gene detail information of Glyur000150s00014570.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01600.1 | 4.00E-76 | ferretin 1 |
| NR | XP_003623359.1 | 1.02E-146 | Ferritin-1 [Medicago truncatula] |
| COG | YP_002465080.1 | 8.00E-18 | ferroxidase [Chloroflexus aggregans DSM 9485] |
| Swissprot | tr|P19976|FRI1_SOYBN | 4.00E-147 | Ferritin-1, chloroplastic (Precursor) |
| trEMBL | tr|G7KT76|G7KT76_MEDTR | 4.00E-147 | Ferritin {ECO:0000256|RuleBase:RU361145} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 134291 | 137691 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00522 | FTH1 | EC:1.16.3.2 | Mineral absorption | map04978 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014570.1 | PF00210.19 | Ferritin | 90 | 234 | 4.80E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 52.790 |
| SRR1783600 | control | 53.050 |
| SRR1783602 | moderate drought stress | 56.883 |
| SRR1811619 | moderate drought stress | 56.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.132 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.612 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 540.920 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 526.677 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.021 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.375 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.494 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 45.234 |
| SRR2868004 | Drought Stress(Tissue:root) | 34.905 |
| SRR2967015 | Control (Tissue:root) | 51.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.672 |
| SRR9715740 | Leave | 11.658 |
| SRR9715741 | Leave | 6.534 |
| SRR9715739 | Root | 26.293 |
| SRR9715742 | Root | 37.093 |
| SRR9715743 | Root | 35.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.184 |
| SRR8749028 | MeJA induced 9h | 4.194 |
| SRR8749029 | MeJA induced 9h | 11.557 |
| SRR8749030 | Uninduced | 2.166 |
| SRR8749031 | Uninduced | 4.088 |
| SRR8749032 | Uninduced | 5.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 161.043 |
| SRR8400027 | Control-Root | 212.363 |