Gene detail information of Glyur000150s00014572.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60620.1 | 0 | glycerol-3-phosphate acyltransferase 9 |
| NR | XP_004487931.1 | 0 | PREDICTED: glycerol-3-phosphate acyltransferase 3-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8L7R3|LPCT1_ARATH | 4.00E-10 | Lysophospholipid acyltransferase LPEAT1 |
| trEMBL | tr|I1L2T5|I1L2T5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G21150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00150 | 139083 | 150225 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13506 | GPAT3_4, AGPAT9, AGPAT6 | EC:2.3.1.15 | Glycerolipid metabolism | map00561 |
| Glycerophospholipid metabolism | map00564 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000150s00014572.1 | PF01553.16 | Acyltransferase | 225 | 347 | 2.90E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.620 |
| SRR1783600 | control | 12.919 |
| SRR1783602 | moderate drought stress | 10.414 |
| SRR1811619 | moderate drought stress | 10.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.032 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.390 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.149 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.339 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.274 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.701 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.548 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 20.569 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.258 |
| SRR2967015 | Control (Tissue:root) | 17.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.891 |
| SRR9715740 | Leave | 12.206 |
| SRR9715741 | Leave | 12.559 |
| SRR9715739 | Root | 7.620 |
| SRR9715742 | Root | 10.166 |
| SRR9715743 | Root | 9.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.824 |
| SRR8749028 | MeJA induced 9h | 11.035 |
| SRR8749029 | MeJA induced 9h | 8.744 |
| SRR8749030 | Uninduced | 11.961 |
| SRR8749031 | Uninduced | 6.340 |
| SRR8749032 | Uninduced | 7.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 20.675 |
| SRR8400027 | Control-Root | 22.986 |