Gene detail information of Glyur000150s00014582.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67510.10Leucine-rich repeat protein kinase family protein
NRXP_004492498.10PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum]
COGYP_001192956.18.00E-31two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q9C9N5|Y1668_ARATH3.00E-153Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 (Precursor)
trEMBLtr|G7KTA0|G7KTA0_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES79601.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00150201388205425+


Gene family

Gene familysubfamily
Transcription Factors FamilyS1Fa-like
Protein Kinases FamilyPPC:1.9.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0006468  protein phosphorylation


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000150s00014582.1PF08263.7LRRNT_222611.30E-09
Glyur000150s00014582.1PF13855.1LRR_81422033.30E-09
Glyur000150s00014582.1PF04689.8S1FA3063410.00016
Glyur000150s00014582.1PF00069.20Pkinase4266342.10E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.397
SRR1783600control11.138
SRR1783602moderate drought stress7.415
SRR1811619moderate drought stress6.922

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.392
DRR006520Root Summer glycyrrhizin high producing strain8.055
DRR006521Root Winter glycyrrhizin high producing strain0.913
DRR006522Root Winter glycyrrhizin high producing strain0.819
DRR006523Root Summer glycyrrhizin low producing strain6.250
DRR006524Root Summer glycyrrhizin low producing strain6.507
DRR006525Leaf Summer glycyrrhizin high producing strain9.446
DRR006526Leaf Summer glycyrrhizin high producing strain8.763

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.191
SRR2868004Drought Stress(Tissue:root)14.981
SRR2967015Control (Tissue:root)16.703

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.805
SRR9715740Leave5.616
SRR9715741Leave3.487
SRR9715739Root14.182
SRR9715742Root11.119
SRR9715743Root9.953

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.061
SRR8749028MeJA induced 9h2.535
SRR8749029MeJA induced 9h2.052
SRR8749030Uninduced1.333
SRR8749031Uninduced0.488
SRR8749032Uninduced1.010

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.913
SRR8400027Control-Root17.392

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved