Gene detail information of Glyur000151s00010720.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13790.2 | 0 | Glycosyl hydrolases family 32 protein |
| NR | XP_004515311.1 | 0 | PREDICTED: beta-fructofuranosidase, cell wall isozyme-like isoform X1 [Cicer arietinum] |
| COG | YP_002489836.1 | 6.00E-43 | glycoside hydrolase family protein [Arthrobacter chlorophenolicus A6] |
| Swissprot | tr|Q43089|INV1_PEA | 0 | Beta-fructofuranosidase, cell wall isozyme (Precursor) |
| trEMBL | tr|G7KBM7|G7KBM7_MEDTR | 0 | Cell-wall invertase {ECO:0000313|EMBL:AES98262.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00151 | 5428 | 15134 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH32 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01193 | INV, sacA | EC:3.2.1.26 | Galactose metabolism | map00052 |
| Starch and sucrose metabolism | map00500 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000151s00010720.1 | PF00251.15 | Glyco_hydro_32N | 64 | 391 | 3.10E-102 |
| Glyur000151s00010720.1 | PF08244.7 | Glyco_hydro_32C | 474 | 550 | 2.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.021 |
| SRR1811619 | moderate drought stress | 0.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.210 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.045 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.494 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.502 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.138 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.790 |
| SRR9715740 | Leave | 0.436 |
| SRR9715741 | Leave | 0.407 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.035 |
| SRR8749031 | Uninduced | 0.043 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.005 |
| SRR8400027 | Control-Root | 0.037 |