Gene detail information of Glyur000151s00010735.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44745.1 | 6.00E-22 | WRKY family transcription factor |
| NR | XP_011017378.1 | 1.63E-46 | PREDICTED: probable WRKY transcription factor 12 [Populus euphratica] |
| Swissprot | tr|Q93WY4|WRK12_ARATH | 1.00E-26 | Probable WRKY transcription factor 12 |
| trEMBL | tr|U5FPM1|U5FPM1_POPTR | 2.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:ERP52965.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00151 | 103215 | 110418 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000151s00010735.1 | PF03106.10 | WRKY | 103 | 139 | 2.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.918 |
| SRR1783600 | control | 0.945 |
| SRR1783602 | moderate drought stress | 5.296 |
| SRR1811619 | moderate drought stress | 5.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.645 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.953 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.001 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.724 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 53.132 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.856 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.332 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.996 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.678 |
| SRR2967015 | Control (Tissue:root) | 1.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.492 |
| SRR9715740 | Leave | 0.814 |
| SRR9715741 | Leave | 0.979 |
| SRR9715739 | Root | 1.133 |
| SRR9715742 | Root | 7.557 |
| SRR9715743 | Root | 4.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.115 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.810 |
| SRR8400027 | Control-Root | 7.668 |