Gene detail information of Glyur000152s00012694.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07900.11.00E-40Mitochondrial transcription termination factor family protein
NRKEH37234.14.22E-143mTERF protein [Medicago truncatula]
trEMBLtr|A0A072V5D1|A0A072V5D1_MEDTR2.00E-143mTERF protein {ECO:0000313|EMBL:KEH37234.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001523106832027-


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000152s00012694.1PF02536.9mTERF181713.50E-14
Glyur000152s00012694.1PF02536.9mTERF1822852.50E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.616
SRR1783600control2.579
SRR1783602moderate drought stress0.799
SRR1811619moderate drought stress0.855

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.942
DRR006520Root Summer glycyrrhizin high producing strain1.863
DRR006521Root Winter glycyrrhizin high producing strain1.866
DRR006522Root Winter glycyrrhizin high producing strain1.637
DRR006523Root Summer glycyrrhizin low producing strain2.245
DRR006524Root Summer glycyrrhizin low producing strain2.390
DRR006525Leaf Summer glycyrrhizin high producing strain0.115
DRR006526Leaf Summer glycyrrhizin high producing strain0.119

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.589
SRR2868004Drought Stress(Tissue:root)7.479
SRR2967015Control (Tissue:root)7.893

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.054
SRR9715740Leave2.720
SRR9715741Leave2.255
SRR9715739Root5.103
SRR9715742Root3.467
SRR9715743Root3.104

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.299
SRR8749028MeJA induced 9h4.375
SRR8749029MeJA induced 9h2.528
SRR8749030Uninduced4.300
SRR8749031Uninduced2.829
SRR8749032Uninduced1.872

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.375
SRR8400027Control-Root7.678

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved